Results for "Run"
Bio-Scripts
...ependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E...ependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E...ependency style of gcc... gcc3 checking how to run the C preprocessor... gcc -E...2147 days ago
Perl script to run SATSUMA in loop !
#!/usr/bin/perl -w use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to set the reference multifasta file name he...2136 days ago
- ...stus-3.2.3/bin export PATH=$PATH:/home/urbe/Tools/augustus-3.2.3/scripts export AUGUSTUS_CONFIG_PATH=/home/urbe/Tools/augustus-3.2.3/config #run BUSCO python BUSCO.py -i /me...
2133 days ago
Install Parrot Virtual Machine !
...you for a few pieces of info. Since you're running this program, you obvious...Parrot. After that, you can use `make test' to run the test suite. Happy Hack...t Read a keystroke before starting --runtime-prefix -v --ver...1533 days ago
Resume the MIRA assembler run !
mira -r manifest_file Usage: mira [options] manifest_file [manifest_file ...] Options: -c / --cwd= directory Change working directory -r...1730 days ago
Install Python locally on shared Linux server !
...H=$HOME/python/Python-2.7.11 #Finally, refresh the current session by running the command: source ~/...perly. At this point, you should be #able to see a new python. To check, run this command: which python...2094 days ago
- ...rkTool toolArgs [ -- --spark-runner sparkArgs ] Getting h...ling metrics for a sequencing run. CollectIlluminaLaneMe...s of a CrosscheckFingerprints run by LOD score CollectAlig...naligned or aligned reads and runs BWA (if specified), MarkDupl...
2071 days ago
- ...denovo_asm) [jnarayan@hmem00 FALCON-examples]$ ../git-sym/git-sym update run/greg200k-sv2/ mkdir -p /home.../users/j/n/jnarayan/FALCON-examples/.git/git-sym-local/cache -> in dir 'run/greg200k-sv2/' '../../../.g...
2030 days ago
- #!/bin/bash cd `pwd` perl ~/apps/SSPACE-1.2_linux-x86_64/SSPACE_v1-2.pl \ -l libraries.txt \ -s Contigs_over200_nocp.fasta \ -k 5 \ -a 0.7 \ -x 1 \ -m 30 \ -o 20 \ -b Rayk31_scaffolds_extension
1719 days ago
Perl script to run in parellel !
...set, $chr_seq) = @_; print "starting XFOIL instance with parameters $chr_set!\n"; touch( "$chr_set.out", $chr_seq ); print "finished run with parameters $chr_set!\n";...1682 days ago
