Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) experiments. Hagfish builds on the concept of coverage plots and aims to assist (am...2900 days ago
RCircos: an R package for Circos 2D track plots
...be easily integrated into other R data processing and graphic manipulation pipelines for presenting large-scale multi-sample genomic research data. It can also serve as a base tool to generate complex Circos im...2901 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinformatics jobs that consist of a ser...cs! If you use Bpipe, please cite: Sadedin S, Pope B & Oshlack A, Bpipe: A Tool for Running and Managing Bioi...2899 days ago
PolyPhen-2: Prediction of functional effects of human nsSNPs
PolyPhen-2 (Polymorphism Phenotyping v2) is a tool which predicts possible impact of an amino acid substitution on the structure and function of a human protein using straightforward physical and comparative considerations.2898 days ago
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CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a ran...rarily large phylogenetic distances. Results: We present Cnidaria, a practical tool for clustering genomic and tr...2873 days ago
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