Results for "SOAP"
Blogs
Protocol for De novo Genome Assembly using Illumina Reads
...ange of short-read assemblers are available. Everyone with strengths and disadvantages of their own. Some of the assemblers available include:VelvetSOAP-denovoMIRAALLPATHS Next step...1219 days ago
Bookmarks
SOAP2 : Short Oligonucleotide Analysis Package 2
SOAPaligner/soap2 is a member of the SOAP (Short Oligonucleotide Analysis P...age). It is an updated version of SOAP software for short oligonucle...lexa Genome Analyzer. Compared to soap v1, it is one order of magnit...wide range of the read length. SOAPaligner benefitted in time and...2188 days ago
Top-level pages
Commercial and public next-gen-seq (NGS) software
...of the sequence files as an input for alignment to a reference sequence or a set of reference sequences. Authors are from BCGSC. Paper is here. SOAP - SOAP (Short Oligonucleotide Alignm...3533 days ago
Software packages for next gen sequence analysis
...the sequence files as an input for alignment to a reference sequence or a set of reference sequences. Authors are from BCGSC. Paper is here. * SOAP - SOAP (Short Oligonucleotide Alignm...3257 days ago
- +3 more Top-level pages
News
- ...is primarily a bugfix release relative to the last public release(9.12). Major user-visible changes include: # Modeller now includes a variety of SOAP (statistically optimized atom...
3748 days ago
Bio-Scripts
- (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen s...
1230 days ago
Tags
SOAP2 : Short Oligonucleotide Analysis Package 2
SOAPaligner/soap2 is a member of the SOAP (Short Oligonucleotide Analysis Package). It is an updated version of SOAP software for short oligonucleotide alignment. The new program features in super fast and accurate alignment for huge amounts of short reads generated by Illumina/Solexa Genome Anal...Tags: SOAPaligner, soap2, SOAP, Short, Oligonucleotide, Analysis, Package
2188 days ago
Comments
Comment on "Commercial and public next-gen-seq (NGS) software"
...ina_docs/Velvet:http://www.ebi.ac.uk/~zerbino/velvet/Maq (Mapping and Assembly with Quality): http://maq.sourceforge.net/maq-man.shtmlSOAP alignment tool: http://soap.genomics.org.cn/SeqMaq: http:...3637 days ago
