Results for "Scriptn GTF"
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Public Databases for Bioinformatics !
https://www.nature.com/articles/s41467-020-17155-yServer Infrastructure: File Server...ebi.ac.uk/pub/databases/gencode/Gencode_human/release_29/gencode.v29.annotation.gtf.gz.1151 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation fi...orts most commonly used file formats including SAM/BAM, Wiggle/BigWig, BED, GFF/GTF, VCF. CrossMap is designed t...
3020 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation...orts most commonly used file formats including SAM/BAM, Wiggle/BigWig, BED, GFF/GTF, VCF. CrossMap is designed t...
2811 days ago
- Collectively, the bedtools utilities are a swiss-army knife of tools for a wi...s from multiple files in widely-used genomic file formats such as BAM, BED, GFF/GTF, VCF. While each individual t...
2639 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://ww...h internal construction of a transcriptome from a given genomic reference and a GTF file. ...an...2536 days ago
Biological file format tutorial
This section explains some of the commonly used file formats in bioinformatics. The inf...rmation resources on web for more details. FASTA FASTQ SAM BAM VCF GFF GTF...2342 days ago
CrossMap: a program for convenient conversion of genome coordinates
CrossMap is a program for convenient conversion of genome coordinates (or annotation fi...orts most commonly used file formats including SAM/BAM, Wiggle/BigWig, BED, GFF/GTF, VCF. CrossMap is designed...2178 days ago
GffCompare: Program for processing GTF/GFF files
The program gffcompare can be used to compare, merge, annotate and estimate accuracy of one or more GFF files (the “query” files), when compared with a reference annotation (also provided as GFF).1773 days ago
Liftoff: an accurate tool that maps annotations in GFF or GTF between assemblies
Liftoff, an accurate tool that maps annotations in GFF or GTF between assemblies of the same, or closely-related species. Unlike current coordinate lift-over tools which require a pre-generate...1416 days ago
Liftoff: An accurate GFF3/GTF lift over pipeline
Liftoff is a tool that accurately maps annotations in GFF or GTF between assemblies of the same, or closely-related species. Unlike current coordinate lift-over tools which require a pre-generated...1244 days ago
