Results for "Sequence"
Blogs
DNA testing companies around the globe !
.... The order in which the bases occur in DNA is referred to as the DNA sequence. Each person is unique and ju...their fingerprints, they also have a unique and slightly different DNA sequence. Half of a person’s DNA...2485 days ago
List of genome announcement, notes and reporting journals
...s) that present a new chromosome sequence, its GenBank accession number...te, eukaryote or virus) has been sequenced and providing a citable reco...olutionary message of new genome sequences as they become submitted to...(∼500-word) article on newly sequenced genome. Article format must...2006 days ago
String graph based genome assembly software and tools !
...lidation to remove the branches based on read coverage and paired-end information, resulting in high-quality consensus sequences of reads sharing the seeds. Such consensus sequences are then extended to contigs...2326 days ago
List of cancer genomics research web resources !
...ces GDAC http://gdac.broadinstitute.org/ Data analysis; automatic pipelines; user-friendly reports SNP500Cancer http://snp500cancer.nci.nih.gov Sequence and genotype verification of...2318 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
...l can now generate 10–20 Gb of DNA sequence data. Ultra-long read le.../ nanoCORRError-correction tool for nanopore sequence datahttps://github.com/jgurto...nanoporeVariant-detection tool for nanopore sequence datahttps://github.com/mitenj...2318 days ago
BBTools for bioinformatician !
...sp; Code: reformat.sh in=sequences.fasta out=renamed.fasta trd...gth, you can identify adapter sequences with BBMerge, like this (the...are set for relatively short sequences so if they are many megabase...will forcibly align a primer sequence (or a set of primer sequences...2268 days ago
Basic command-line to run BLAST
...ein.faa These are protein sequences in FASTA format. FASTA forma...en contains one or more lines of sequence text. Note that the files ar...h] [-html] [-max_target_seqs num_sequences] [-num_threads int_value] [-...h] [-html] [-max_target_seqs num_sequences] [-num_threads int_value] [-...2242 days ago
- ...Over input.bed hg18ToHg19.over.chain.gz output.bed unlifted.bed The outformat is as follow: Deleted in new: Sequence intersects no chains Partially deleted in new: Sequence insufficiently intersects one...
2158 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that is widespread an...ons in neuropeptide precursor sequences. Non-Redundant Patent S...onserved and specific protein sequence motifs. TreeDet -- Predi...1991 days ago
Understanding reads mapping and flags !
Linear Alignment: An alignment of a read to a single reference sequence that may include insertions...align to multiple positions, we can find one alignmnet position which sequence do not have large overlaps, i...1835 days ago
