Tools to detect synteny blocks regions among multiple genomes
...mes. Ovcharenko et. al. define it as ‘any conserved sequence blocks, regardless of whether it encompasses multiple genes, an area containing single genes, or areas devoid of kno...2616 days ago
The 5 reasons to mistakes at bioinformatics work !!!
...ead of puzzling it out at end check out and clear your doubt even for a single error. It may can leads to wr...te. In other word they are no more than 95 percent complete. Sometime a single problem can halt your entire...2112 days ago
Computer simulation of genetic mechanism !!
...m.github.io/ SelSim SelSim is a program for Monte Carlo simulation of DNA polymorphism data for a recom- bining region within which a single bi-allelic site has experienc...2981 days ago
2809 days ago
Structural variation: the hidden genomic treasure
...ntial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNP...reakSeqa pipeline for annotation, classification and analysis of SVs at single nucleotide resolution.2010 P...2709 days ago
Software and Tools to detect structure variation with long reads !!
...st novel SV variants. 8-10X PacBio coverage of single genomes or trios reveals trip...SVs detectable by short-read data. With Single Molecule, Real-Time (SMRT) Se...t: A Structural Variation Tool. Why ask a single sv-detection approach to find...2614 days ago
List of Research Institutes in India (Biological Sciences/ Biotechnology)
...r Biological ScienceGKVK, Bellary Road,Email: dean@ncbs.res.inWeb: www.ncbs.res.inResearch Areas: The research interests of the faculty range from single molecules to systems biology....2370 days ago
BBTools for bioinformatician !
...nbsp; Using Paired-end and single-end reads at the same time BBMap itself can only run single-ended or paired-ended in a si...use all kmers are stored in a single table. It can still do non-km...dquo; paired end reads from a single end read file Co...2277 days ago
Basic command-line to run BLAST
...stp \ -query cow.small.faa \ -db human.1.protein.faa \ -out cow_vs_human_blast_results.tab \ -evalue 1e-5 \ -outfmt 7 I broke the long single command into many lines with...2250 days ago
chromoMap-An R package for Interactive visualization and mapping of human chromosomes
...Users can investigate the detailed information about the mappings (like gene names or total genes mapped on a location) or can view the magnified single or double stranded view of th...2147 days ago