Results for "Species"
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DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
...ific sequencing technology, the models proposed in DAVI are generic and can be used across different NGS technologies as well as across different species https://iopscience.iop.org/a...1157 days ago
- ...program for aligning DNA sequences, a pairwise aligner. Originally designed to handle sequences the size of human chromosomes and from different species, it is also useful for sequen...
2950 days ago
Alignment of closely related whole genomes/scaffolds
...he relative ease and low cost of current generation sequencing technologies has led to a dramatic increase in the number of sequenced genomes for species across the tree of life. This...3030 days ago
- ...r, it can also transfer annotations between strains and even different species, like Plasmodium chabaudi onto P. berghei, between different Leishmania species or Salmonella enterica onto o...
3020 days ago
- ...s. It’s not a program for aligning sequences to reference genome. We do not recommend using CrossMap to convert genome coordinates between species. More at http://crossmap.sou...
3019 days ago
- flo - same species annotations lift over pipeline Lift over is the process of transferring an...lift over is done because there is a new, improved genome assembly for the species and good quality annotations...
3018 days ago
- ...t genomes are difficult to infer, and in most species they are still unknown. Recen...ons for each chromosome in 14 different yeast species. For yeasts with large centro...predict centromere coordinates for six yeast species that currently lack centromer...
3016 days ago
Ensembl comparative genomics resources
...informatics infrastructure and data presentation across all supported species. Specialized web-based visual...nfrastructure is extensively reused for the analysis of non-vertebrate species by other projects including E...2999 days ago
- ...ion pipelines. BUSCO assessments offer intuitive metrics, based on evolutionarily informed expectations of gene content from hundreds of species, to gauge completeness of rap...
2928 days ago
- Blobsplorer is a tool for interactive visualization of assembled DNA sequence data ("contigs") derived from (often unintentionally) mixed-species pools. It allows the simultaneous dis...
2893 days ago
