Results for "System biology approach"
Bio-Scripts
jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ sudo docker system df TYPE TOTAL...-MT:~/Downloads/testDock$ sudo docker system prune WARNING! This will rem...-MT:~/Downloads/testDock$ sudo docker system...an81/autoConTAMPR/issues Operating system:...1521 days ago
Install and set up i-adhore for synteny and wgd analysis ! -- step by step --
#Need to download i-adhore-3.0.01.tar.gz from https://wdiceryfd4rjn74bjhhtz2k5di--bioinform...aSet.cpp:306:11: warning: ignoring return value of ‘int system(...th attribute warn_unused_result [-Wunused-result] system(c...1215 days ago
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
use strict; use warnings; use ExtUtils::Installed; use LWP::Simple; use Archive::Extract...if all the required modules have been installed in the system...($result); #do your magic here sub parseResult { system (...1172 days ago
- #use strict; use warnings; use ExtUtils::Installed; use LWP::Simple; use Archive::Extract; # # First, check if all the required modules have been installed in the system a...
1170 days ago
Perl script to check modules installed !
#use strict; use warnings; use ExtUtils::Installed; # # First, check if all the required modules have been installed in the system...1167 days ago
List of string comparison algorithms !
String comparison: Levenshtein Distance Damerau-Levenshtein Distance Jaro Distance Jaro-Winkler Distance Match Rating Approach Comparison Hamming Distance More at https://jellyfish.readthedocs.io/en/latest/comparison.html994 days ago
- # Make sure that Java v8+ is installed: java -version # Install Nextflow curl -fsSL get.nextflow.io | bash # Add Nextflow binary to your PATH: mv nextflow ~/bin/ # OR system-wide installation: # sudo mv nextflow /usr/local/bin
974 days ago
Get the Linux system information !
#!/bin/bash # while-menu-dialog: a menu driven system information program DIALOG_CANCEL=1...selection=$(dialog \ --backtitle "System Information" \ --title "..." $HEIGHT $WIDTH 4 \ "1" "Display System...TNAME"; uptime) display_result "System I...960 days ago
- #R is a feature rich interpretive programming language originally released in 1995. It is hea...e the installation with --with-x=no which tells R to install without X11, a windowing system f...
835 days ago
Commands to get the detail of disk usage on Linux !
#A simplistic approach would be du -shc /home/* du -shc /home/jnarayan #To sort it: du -smc /home/* | sort -n #There is also a wellknown Perl script that has the option of mailing disk usage reports per user: durep http://www.ubuntugeek.com/create-disk-usage-reports-with-durep.html827 days ago
