Results for "Systems Biology and Computational Biology; Molecular Biology"
Top-level pages
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamenta...tion sites on protein surface and tools for predicting the structure of the intermolecular com...tic Identification of pockets and cavi...ints. Ligand Binding Sites 3DLigandSite...2224 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools inclu...na, Ion Torrent, 454 (Roche), and Pac Bio DNA-Seq Feature, can ann...d the Ensembl gene annotation systems; can compare mutations detected...s information from PolyPhen-2 and SIFT Input: tab-delimited with col...2930 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...gargantuan geology or bigtime biology project. And other disciplines, of course. Alexander von Humboldt Foundation:&nb...ience, engineering, astronomy and vision....al models, gene therapy, neurobiology and development of the basal...igh priority on both clinical and basic scientific research into th...2959 days ago
- SLURM is a queue management system and stands for Simple Linux Utility for...wrence Livermore National Lab and currently runs some of the la...many ways to most other queue systems. You...des when to schedule your job and how...pared to other job management systems:...iority job. It also does kill and req...
2936 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scien...enome is repetitive in nature and as improvements are made in d...r whether the nucleic acid strand is read starting from the 3'...l reads CGAAGC. The European Molecular Biology Open Software Suite (EMBOSS)...2233 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as th...our assembly. For the sake of computational memory saving and convenience of data inquiry,...described in the Genome Biology manuscript. misFinder v0...2707 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTuner...with your MySQL configuration and make recommendations for incr...p;- A free/open source client and automation tool for Ragnarok...active console text-based command-line Twitter client written i...2511 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have...here "hair" is the character, and "present" and "absent" are its states. cla...condition of that character, and to have arisen later in the e...bsp; systematics -- Field of biology that deals with the diversity...2484 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-se...nces from reference sequences and RNA-seq data (k-mer based) S...notyping of known SNPs (dbSNP and Affymetrix's Genome-Wide Huma...mapper Minimap Lightweight and fast read...tware (Python) http://jordan.biology.gatech.edu/page/software/stri...2393 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in the late 00’s and has been widely used since Me...bsp;for studying heterogeneous systems, e.g. early development studie....com/nghiavtr/BPSC Sincera: A Computat...fy human islet cell signatures and revea...156605/SLICER SinQC: A Method and Too...2372 days ago
