Results for "TF"
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Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.2897 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinformatics jobs that consist of a series of processing stages - known as 'pipelines'. January 20th, 2016 - New! Bpipe 0.9.9 rel...2899 days ago
- In a nutshell Anvi’o is an analysis and visualization platform for ‘omics data. Please find...ledgements section of our methods paper An analysis and visualization platform for 'omics data http:...
2873 days ago
- ...g code. CSBB is currently available on Linux, UNIX, MAC OS and Windows platforms. Currently CSBB provides...e expression to z-scores when comparing expression data from different platforms. More at https://gi...
2860 days ago
- _A5-miseq_ is a pipeline for assembling DNA sequence data generated on the Illumina sequencing platform. This README will take you through the steps necessary for running _A5-miseq_...
2810 days ago
- ...Mouse mm9 (MGSCv37) <> mm10 (GRCm38)). It supports most commonly used file formats including SAM/BAM, Wiggle/BigWig, BED, GFF/GTF, VCF. CrossMap is designed t...
2792 days ago
BLAST Ring Image Generator (BRIG)
BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly dat...2767 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neutral markers (e.g. SNPs) and loci under selection...2766 days ago
- ...me of a given set of organisms. Using the proteomes of these organisms, AccNET create a bipartite network compatible with common network analysis platforms. AccNET collects phylogen...
2760 days ago
- ...d deep sequencing data. In its present implementation MIRO is especially adapted for the analysis of reads generated with the Illumina sequencing platform. MIRO allows to preprocess...
2763 days ago
