Genome Assembly Tools and Software - PART1 !!
...d scaffolds. Telescoper 0.2 – De novo Assembly Algorithm Telescoper is a local assembly algorithm designed for short-reads from NGS platforms such as Illumina. The rea...2684 days ago
Source Code and Pseudo Code !!
...(algorithmic) design tool. The rules of Pseudocode are reasonably straightforward. All statements showing...endif end while if consec cntr >= 3 printf (Appropriate message 1 and sk...2658 days ago
Perl Special Vars Quick Reference
...${^OPEN} Internal use: \0 separated Input / Output layer information. ${^UNICODE} Read-only Unicode settings. ${^UTF8CACHE} State of the internal UTF-8 offset caching code. $...2643 days ago
Awesome perl frameworks, libraries and software - PART 1
...bw/Template2 - Perl Template Toolkit v2 stf-storage/stf - STF - Distributed Obje...e Javascript-power of Firefox cooldaemon/RabbitFoot - An asynchronous and...Lab/coge - CoGe (Comparative Genomics) Platform hirose31/inspect-perl-pro...2488 days ago
2488 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the world wide web. Dynamic web pages—the precursor to modern web applications—were easy to creat...2320 days ago
2304 days ago
PerlOneLiner for Bioinformatician
...r all lines in a file using a custom format (emulate cat -n)perl -ne 'printf "%-5d %s", $., $_' # Print t..." =~ /(\d+)/g; print $u'perl -le '$ip="127.0.0.1"; $ip =~ s/(\d+)\.?/sprintf("%02x", $1)/ge; print hex($ip...2301 days ago
List of visualization tools for network biology
...tm Pathview Tool set for pathway-based data integration and visualization http://Pathview.r-forge.r-project.org/ PINA Integrated platform for protein interaction ne...2287 days ago
List of visualization tools for genome alignments
...ractive Java application that uses a novel graph-based representation to display a sequence assembly and associated metadata http://www.bcgsc.ca/platform/bioinfo/software/abyss-exp...2283 days ago