Results for "The Lysak Lab"
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Public Databases for Bioinformatics !
...on 108TB disk storage 10Gb ethernet to SCG3 Access atx: dhar...ould store code, papers, and other highly processed data here...quote you must chown /mnt/lab_data/$LAB/...t not backed up ie if the hard drives fail or you delet..." For use case 1 we obtained the following ENCODE and ROADMAP...1145 days ago
Bioinformatician stuck in wet-lab
This guide is aimed at pet bioinformaticians, and is meant to guide them towards better car...3657 days ago
Swabs to Genomes: A Comprehensive Workflow
The sequencing, assembly, and basic analysis of microbial genom...e almost trivial for research labs with access to standard mole...computational tools. However, there...a wide variety of options available for DNA library preparation...rested in microbial genomics. The objective of the present stud...3562 days ago
Software developed in pevsner lab
DRAGON: Database Referencing of Array Genes Online SNOMAD: Standardization and Normalization of Microarray Data SNPduo: SNP Analysis Between Two Ind...3505 days ago
- The Bio.SeqLoc modules in seqloc are designed to represent positions and location...e sequences. My original motivation for writing these packages was handing the l...locations for bioinformatics http://www.ingolia-lab.org/seqloc-tutorial.html
3422 days ago
- MAKER is a portable and easily configurable genome annotation pipeline.I...ome projects to independently annotate their genomes and to create genom...gene predictions and automatically synthesi...ty values. More at http://www.yandell-lab.org/software/maker.html
3016 days ago
- This software is designed to identify both simple and complex rearrangements from pai...ling different sub-functions separately. More at https://github.com/mills-lab/svelter/
2994 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
PEAR is an ultrafast, memory-efficient and highly accurate pair-end...nd read overlaps and without requiring the target fragment size as input...minimizing false-positive results. Together...ter. More at http://www.exelixis-lab.org/web/software/pear Paper:...2957 days ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a QC step Blaxter Lab, Institute of Evolutionary Bi...plots (TAGC plots) to visualise the c...bash/perl/R scripts for running the analysis presented in the pap...
2889 days ago
AutoDock Vina: an open-source program for doing molecular docking.
AutoDock Vina is an open-source program for doing molecular doc...ted by Dr. Oleg Trott in the Molecular Graphics Lab at The S...-ligand docking. AutoDock 4 is available under the GNU General Public License. AutoDock is one of the most cited docking software a...1428 days ago
