1149 days ago
Oxford Nanopore Sequencing, Hybrid Error Correction, and de novo Assembly of a Eukaryotic Genome
...e long nanopore reads presents a much more complete representation of the features of the genome and correctly assembles gene cassettes, rRNAs, transposable elements, and other genomic f...2359 days ago
dnaPipeTE: de-novo assembly & annotation Pipeline for Transposable Elements
...novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify Transposable Elements in small samples of...;http://lbbe.univ-lyon1.fr/-Equipe-Elements-transposables-.html?lang=en You can f...2355 days ago
Genome Assembly Tools and Software - PART1 !!
...r as a graph, depending on the user choice. Tedna 1.2.2 – Transposable Element De Novo Assembler Tedna is a lightweight de novo transposable element assembler. It assembl...2695 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on genome sequencing, assembly, annotation and alignment has generated increasing int...2283 days ago
3849 days ago
3876 days ago
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dnaPipeTE: de-novo assembly & annotation Pipeline for Transposable Elements
dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify Transposable Elements in small samples of NGS datasets. It is very useful to quantify the proportion of TEs in newly sequenced genomes since it does not requ...Tags: dnaPipeTE, de-novo, assembly, annotation, Pipeline, Transposable, Elements
2355 days ago
dnaPipeTE: a pipeline designed to find, annotate and quantify Transposable Elements
dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify Transposable Elements in small samples of NGS datasets. It is very useful to quantify the proportion of TEs in newly sequenced genomes since it does not requ...Tags: dnaPipeTE, pipeline, find, annotate, quantify, Transposable, Elements, TEs
1737 days ago