VCF2PopTree: a client-side software to construct population phylogeny from genome-wide SNPs
VCF2PopTree is a client-side software written in Javascript and it runs p...rsquo;s computer/browser. VCF2PopTree is compatible with all popula...). Furthermore, it displays the tree in a mobile phone (iPhone and..., U. and Chen, D. (2019). VCF2PopTree:...872 days ago
855 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
Genomicus is a genome browser that enables users to navigate in genomes in several dimensions: linearly along chro...sp;Ensembl. Summary statistics of Genomicus version 105.01: (view species tree...806 days ago
InteractiVenn: a web-based tool for the analysis of sets through Venn diagrams
InteractiVenn, a more flexible tool for interacting with Venn diagrams including up to six sets. It offers a clean...veal differences and similarities among sets and may be guided in our tool by a tree...686 days ago
OneZoom tree of life explorer...
An interactive map of the evolutionary links between all living things known to science. Discover your favourites, see which species are under threat, and be amazed by the diversity of life on earth.549 days ago
JBrowse 2: a modular genome browser with views of synteny and structural variation
igvjs - a create-react-app with igv package from npm installed. the igv.js is instrumented to output "DONE" to the console when finished, and to have an increased fe...385 days ago
MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads
MitoHiFi v3.2 is a python pipeline distributed under MIT License ! MitoHiFi was first developed to assemble the mitogenomes for a wide range of species in the Darwin Tree of Life Project (DToL) https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-023-05385-y252 days ago
PhyloHerb: A highâthroughput phylogenomic pipeline for processing genome skimming data
Phylogenomic Analysis Pipeline for Herbarium Specimens What is PhyloHerb: PhyloHerb is a wrapper program to...S+ITS1+5.8S+ITS2+28S), alignments of gene and intergenic regions, and a species tree....252 days ago
Orthoflow: workflow for phylogenetic inference of genome-scale datasets of protein-coding genes
Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes. Our g...ogenetic inference, users can choose a supermatrix approach and/or gene tree inference followed by supertree...84 days ago
PhyloHerb: Phylogenomic Analysis Pipeline for Herbarium Specimens
What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimming data collected from plant m...S+ITS1+5.8S+ITS2+28S), alignments of gene and intergenic regions, and a species tree....84 days ago