Results for "Wellcome Trust Genome Campus"
Top-level pages
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bio...assembly of the European eel genome from nanopore sequencing read...-scale scaffolding of de novo genome assemblies based on chromatin...ed on the FMD-index for large genomes https://github.com/lh3/ferm...oter_tutorial//Tutorial/CustomGenome...2254 days ago
Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for further experimental investigation is a key challenge in current sequencing stud...ingle‐nucleotide variants as well as insertion/deletions variants in the human genome...2216 days ago
- $ sudo apt-get install python-numpy python-scipy python-matplotlib ipython ipython-noteb...###[Mon May 7 11:29:18 2018] Reduction...#file name genome size contigs heterozygous siz...n May 7 11:29:35 2018] Final reduction...#file name genome...
2203 days ago
Gap filling or Contigs extensions tools !
There are many tools to perform gap filling using Illumina short reads, fo...aired reads" or "Toward almost closed genomes with GapFiller". There are a...take a look at the IMAGE tool: http://genomebiology.com/2010/11/4/R41...n't interested in assembling the full genome...2178 days ago
Understanding BLASTn output format 6 !
BLASTn output format 6 BLASTn maps DNA against DNA, for example gene sequences against a reference genomeblastn -query genes.ffn -subject genome.fna -outfmt 6 BLASTn tabula... 2. sseqid subject (e.g., reference genome...2151 days ago
List of non-commercial NGS genotype-calling software
Meaningful analysis of next-generation sequencing (NGS) data, which are produced extensi...ttp://www.broadinstitute.org/gsa/wiki/index.php/The_Genome_Analysis_Toolkit Multi-sample...er.ac.uk/resources/software/margarita) MaCH http://genome...2109 days ago
Bioinformatics in Africa:- Part 1
The Institut Pasteur de Côte d’Ivoire was created by the N°72511 la...;training in bioinformatics and genome data analysis. Sho...07 a yearly regional course of initiation and using genome...1202 days ago
- Elgg is an open source social networking engine that allows the creation of social environments such as campus social networks and internal...
619 days ago
Bioinformatics tools for genome assembly !
There are numerous genome assembly tools available, each with its...is a list of some widely used genome assembly tools as of my last...cell and multi-cell bacterial genomes, as well as small eukaryotic...assembling large and complex genomes. MaSuRCA: A hybrid asse...le for small and medium-sized genome...299 days ago
Steps to find all the repeats in the genome !
To find repeats in a genome from 2 to 9 length using a Perl script, you can use...he RepeatMasker website[0]. Prepare the genome sequence: Make sure you have the genome sequence in a FASTA file form...ecific needs and the characteristics of your genome...261 days ago
