Comment on "A quick guide to Phred scaling"
Phred scaling is a widely used system for representing the quality scores of sequencing reads. It is used to quantify the probability of an error in each base c...414 days ago
Comment on "Short-read assembly using Spades !"
Short-read assembly is the process of constructing a genome sequence from a large number of short sequencing reads. SPAdes (St. Petersburg genome assembler) is...414 days ago
414 days ago
Comment on "Short-read assembly using Spades !"
SPAdes (St. Petersburg genome assembler) is a popular tool for short-read assembly. It can assemble reads generated from Illumina, IonTorrent, PacBio, and Oxfor...420 days ago
Comment on "CovCal: Coverage / Read Count Calculator"
Sequencing coverage is defined as the average number of reads that covers each base of the reference genome. Estimating the sequencing coverage is very important whe...582 days ago
Comment on "List of non-commercial NGS genotype-calling software"
Delly – Structural variant discovery by integrated paired-end and split-read analysis. [ paper-2012 ] lumpy – lumpy: a general probabilistic framew...1141 days ago
Comment on "China’s BGI says it can sequence a genome for just $100"
https://www.genomeweb.com/sequencing/mgi-unveils-extreme-throughput-sequencing-platform-agbt-enable-100-human-genome#.XlpFW5NKg0o1526 days ago
Comment on "China’s BGI says it can sequence a genome for just $100"
https://news.bloomberglaw.com/ip-law/illumina-hits-rival-bgi-with-new-dna-sequencing-patent-lawsuit1526 days ago
Comment on "China’s BGI says it can sequence a genome for just $100"
https://www.genomeweb.com/sequencing/illumina-sues-bgi-again-alleging-new-coolmps-chemistry-infringes-sbs-patents#.XlpFFJNKg0o1526 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
Benchmark (or "High-confidence") variant calls and regions:We developed an integration pipeline to utilize sequencing data generated by multiple technologies to generate variant ca...1559 days ago