Results for "abs"
Bookmarks
...pting is to write scripts. This book is suitable for classroom use as a general introduction to programming concepts. More at http://tldp.org/LDP/abs/html/3009 days ago
- methylKit is an R package for DNA methylation analysis and annotation from high-throughput bisulfite sequencing. The package is designed to deal with sequencing data...
2903 days ago
- This project contains scripts and tutorials on how to assemble individual microbial genomes from metagenomes, as described in: Genome sequences of rare, uncultured b...
2630 days ago
- This project contains scripts and tutorials on how to assemble individual microbial genomes from metagenomes, as described in: Genome sequences of rare, uncultured b...
2619 days ago
Recovery of complete genomes from metagenomes
This project contains scripts and tutorials on how to assemble individual microbial genomes from metagenomes, as described in: Genome sequences of rare, uncultured b...2331 days ago
Cerulean: A hybrid assembly using high throughput short and long reads
..., & Bafna, V. (2013). Cerulean: A hybrid assembly using high throughput short and long reads. arXiv preprint arXiv:1307.7933. http://arxiv.org/abs/1307.79332171 days ago
Platypus: A Haplotype-Based Variant Caller For Next Generation Sequence Data
Platypus is a tool designed for efficient and accurate variant-detection in high-throughput sequencing data. By using local realignment of reads and local assemb...2029 days ago
Π-cyc: A Reference-free SNP Discovery Application using Parallel Graph Search
...aph in multicores shared memory parallel mode using graph decomposition then use filtering method to generate good quality SNPs. https://arxiv.org/abs/1809.06700 https://github.co...1569 days ago
SneakySnake: A Fast and Accurate Universal Genome Pre-Alignment Filter for CPUs, GPUs, and FPGAs
...ent calculation for both short (Illumina) and long (ONT and PacBio) reads. Described by Alser et al. (preliminary version at https://arxiv.org/abs/1910.09020).1242 days ago
