Results for "and ChIP-seq and RNA-seq analysis"
Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic bio...ist you to explain the result and understand your discovery. Al.... Learn to perform root cause analysis, learn enough about the..., but I have other priorities and can’t make work my life.&rdq...3965 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and try to make sense of it, biol...ics of programming languages, and if you are not good at it, then pl...to accomplice your biological analysis work. This means that if you...3722 days ago
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Bookmarks
- I bet, this website will be your best friend in near future. This he...ore the existing open source codes and learn from it. You can find...urce bioinformatics codes for your analysis work. You can use the le...nly used by biological programmers and biologist. Stand on the slumped,...
3931 days ago
Rdatamining.com : R and Data Mining
This website presents examples, documents and resources on data mining with R....l use, including R Reference card for Data Mining, R and Data Mining: Examples and Case Studies and Time Series Analysis and Mining with R.3930 days ago
- +280 more Bookmarks
Files
- Bioinformatician life is interconnected, they always dream for a powerful server, little more space on server as they are generating lots of data per run, dream to publish results in good impact journals, meetings reminders :) and research analysis off course!!!
3925 days ago
- Some fish kidnaped a bioinformatician for their genome analysis.
3868 days ago
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Discussion topics
Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies...ing the GridION™ system and mini...ation of electronic molecular analysis system for use in scient...rop science, security/defence and more. The platform technology...includes biological nanopores and solid-state nanopores. Is this av...3828 days ago
Want to Know which genome assembler rule the world ?
Assemblathon 2: evaluating de novo methods of genome assembly http://www.gigas...ompts-soul-searching.html http://assemblathon.org/post/44431915644/feedback-and-analysis-of-the-assemblathon-2-p &nbs...3935 days ago
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Pages
Bio++ : C Language libraries for your biological need
...mes with a genuinely useful standard library that can itself be implemented in C, and it is both efficient and port...aries are as follows:Sequence analysi...deal with codominant markers and bio-sequence data for individuals....of C++ libraries for sequence analysis, phylogenetics, molecular evo...3962 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.Bi...versity(Bioinformatics Center) and the Open Bio Foundation. The...ject was started in late 2000, and is still in progress. Currently, t...3962 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start...creasing genome sequencing cost and desire to explore and understand biological machani...n challenge is to cope with the analysis of vast production of se...one language are not enough to handle all sort of biological needs, wh...
3963 days ago
- "Bioinformatics is a science of biological predictions and analysis" -- Jitendra Naraya...to provide raw data for later analysis. Once the raw data are availa...oblem are errors in databanks and databases (mostly errors in annota...rgies of different protein ligands) can be characterized by MD simul...
3962 days ago
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Wire posts
News
- PhylomeDB is a public database for complete collections of...ization of phylogenetic trees and mult...rovides genome-wide orthology and paralogy predictions which are based on the analysis of the phylogenetic tree...inference, alignment trimming and evolutionary model testing. Phylom...
3934 days ago
High Density Sheep SNP Genotyping Chip released!!!
If you are working on Sheep genomics then there is a good news for...mIQ in conjunction with Illumina and the...genome-wide association studies and other applications such as ge...tion of quantitative trait loci, and com...mina.com/products/ovinesnp50_dna_analysis_kit.ilmn3912 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
...eration Sequencing (NGS) data analysis. In the context of a fla...ship project aiming at understanding and improving the adaptive capaci...of the comparison of multiple and diverse genomes of a same spe...has computational facilities and expertise in NGS data analysis, and will benefit as well fro...3964 days ago
- van Noort Group is looking for PhD fellows We currently acce...into information by software and tools developed both in acade...gical data becoming available and turn biological information i...-throughput sequencing of DNA and mRN...th high throughput sequencing analysis methods, machine learning, pr...
3964 days ago
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ResearchLabs posts
- Location :European Molecular Biology Laboratory (EMBL), Heidelb...ro assays, quantitative image analysis and cytosim, a computer simulatio...interactions of microtubules and related proteins such as mole...nitiative in Systems Biology, and involved in Cell networks. Link...
3964 days ago
- Melanie Bahlo is an applied statistician working in the areas of statistical genetics, bioinformatics and popu...arch is linkage mapping, in humans and mice. Research Area: Mapp...distantly related individuals CNV analysis in pedigrees and connections to linkage studies St...
3963 days ago
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Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massi...an exponential increase in genomic and biomedical data, which will s...ower to perform current methods of analysis. Extracting new science...s, including spectral graph theory and modern data structures, can be use...3917 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to d...s inversions, transpositions, and duplications, occur. The ge...mutations that cause cancer, and the...subtilis. Until now, genome analysis could only be done in nationa...r development has made genome analysis possible in an ordinary lab....3932 days ago
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Bio-Scripts
- #!/usr/bin/perl use strict; use warnings; my $DNA = "GATTACACAT"; #transcribe DNA to RNA - T changes to U my $RNA = $DNA; $RNA =~ s/T/U/g; print "RNA sequence...
2932 days ago
Check if your coputer ready to use BioPerl
#!/usr/bin/perl use strict; use warnings; #bioperl example code use strict; use warnings; #make the bioperl module (class) accessible to your program use Bio::Seq; print"ok - ready to use Bio::Seq";2932 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is compatib...asically want to do de-novo assembly, map reads, align reads, and expression analysis. Recommendations welcomed. Wh...3546 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3541 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TU...ome, proteome, and metabolome analysis to reveal the molecular...seful tools for comprehensive analysi...a result, it provides strong and flexible ways to do science....2377 days ago
Groups
R is a free software programming language and a software environment for statistical computing and graphics. The R language is w...lability of huge genomic data and biological packages. Bioconductor provides tools for the analysis and comprehension of high-thr...3966 days ago
Python is a programming language that lets you work more quickly and integrate your systems more effectively. Pyth.... It has efficient high-level data structures and a simple but effective approa...oriented programming. Python’s elegant syntax and dyna...3961 days ago
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Tags
Applied Computational Genomics Course at UU: Spring 2020
This course will provide a comprehensive introduction to fundamental concepts and experimental approaches in the analysis and interpretation of experimental genomics data. It will be structured as a series of lectures covering key concepts and analytical strategies. A diverse range of biological ...Tags: genetic variation, structural variation, and ChIP-seq and RNA-seq analysis, bioinformatics
1244 days ago
Comments
Comment on "R and Bioconductor Tutorial"
...entially expressed genes from RNA-Seq data. [4] IRanges – inf...r – interface to online and other genome browsers. chips...eq & ChIPpeakAnno – Chip-Seq More at https://rc.fas.ha...cs/sequencing-information/ngs-analysis-with-r/ http://bioconductor....3685 days ago
