Results for "benchmarking and designing tools"
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Redundans pipeline assists an assembly of heterozygous gen...bled contigs, paired-end and/or mate pairs sequencing libraries and returns scaffolded homoz...dundancy reduction: detection and selectively removal of redund...mmited or replaced by another tools...2795 days ago
- BBMAP • a solution for everything That content has been reformatted and it is being expanded to include more information...for most BBMap suite programs and depending on the file extensi...ll be broken into 6kbp pieces and mappe...tps://www.biostarhandbook.com/tools/bbmap/bbmap-help.html
2757 days ago
- Watch out: only a few files are counted in coverage statistics. Full doc...tation on Read the Docs. A set of tools for viral metagenomics. virmet is called with a command subcommand synta...elp is obtained with virmet subcommand -h. More at https://githu...
2756 days ago
- Seven Bridges is the biomedical data analysis company accelerating breakthroughs in genomics research for cancer, drug development and preci... — the most advanced population genomics tools in the world.
2738 days ago
- ART is a set of simulation tools to generate synthetic next-gen...llumina's Solexa, Roche's 454 and Appli...chmark a variety of method or tools for next-generation sequen...gnment, de novo assembly, SNP and structure variation discovery....or evaluating variant calling tools or methods.
2732 days ago
- HybPiper was designed for targeted sequence capture, in which D...e of Python scripts that wrap and connect bioinformatics tools in order to extract target...example from Illumina MiSeq), and assigns them to target genes...irectory per run of HybPiper, and some of the later scripts take...
2732 days ago
- Topics Displaying and describing data Modeling distributions of data Describing relationships in quantitative data Designing studies Probability Random variables Sampling distributions...icance tests (one sample) Significance tests and c...
2727 days ago
- Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at...Papaya, an all-purpose alignment tool for less diverged sequences; and SLAP, a context-sensi...
2708 days ago
- The automated reconstruction of genome sequences in ancient genome analysis...a multifaceted process. EAGER encompasses both state-of-the-art tools for each step as well as new complementary tools tailored for ancient DNA data...
2695 days ago
CISA: Contig Integrator for Sequence Assembly
A plethora of algorithmic assemblers have been proposed for the de novo...in assemblies of superior contiguity and accuracy, compared with the a...ed by the state-of-the-art assemblers and the hybrid assemblies merged by existing tools. This tool is implemented in...2691 days ago
