Software developed in pevsner lab
...e Patterns in Trios SNPscan: Data Analysis and Visualization of SNP Data pediSNP: Analyze SNP Data From a Pedigree of Two Generations kcoeff: Calculate Cotterman Coefficients of SNP...3494 days ago
2974 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a ta...nd genome size, then select what you want to calculate. Written by Stephen Turner,...lator written by James Hadfield. Coverage is calculated as C=LN/G and reads as N=CG/...2161 days ago
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kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity
...is software implements a de novo, alignment free measure of sample genetic dissimilarity which operates upon raw sequencing reads. It is able to calculate the genetic dissimilarity bet...2164 days ago
Nanopolis: polish a genome assembly
Software package for signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifica...2106 days ago