Bioinformatics Algorithm Demonstrations and Tutorials
...eadsheet program Microsoft Excel. Spreadsheets provide an interesting platform for demonstration of algorithms, since various steps of the calculations can be exposed in a mann...3701 days ago
2802 days ago
3943 days ago
List of In-silico Binding Site Prediction Tools
...a in aldose reductase. This new method uses information derived from calculations of the buriedness of potentia...aals volume of proteins using a Monte carlo algorithm. Based on this calculations, McVol is also able to identi...3740 days ago
Perl script to find coding regions in DNA sequences
...form), that is, 1/64. After this, # the log must be applied to obtain the log-likelihood ratio. # It is recommended the use of logs to manage calculations involving # small numbers be...2152 days ago
Tags: Bioinformatics, Analysis, NGS, Ka, Ks and Ka/Ks, calculations, Genome
2802 days ago
SeQuiLa-cov: A fast and scalable library for depth of coverage calculations
The Docker image is available at https://hub.docker.com/r/biodatageeks/. Supplementary information on benchmarking procedure as well as test data are publicly accessible at the project documentation site http://biodatageeks.org/sequila/benchmarking/benchmarking.html#depth-of-coverage. A...Tags: SeQuiLa-cov, fast, scalable, library, depth, coverage, calculations
1599 days ago