Install ATOM editor on Elemantory OS / Ubuntu
#Download ATOM deb file from https://atom.io/ https://atom.io/download/deb (base) bioqueen@bioqueen-Lenovo-idea...colored output. #Atom is essentially a text editor that you can use for coding...1175 days ago
Perl script to find coding regions in DNA sequences
#!/usr/bin/perl -w use strict; # if the number of input arguments is lower than...intron, respectively. Extremely different values of coding potential should be obtained with the two sequences: high values (positive) for coding...2154 days ago
Perl script to count occurrence of a character !
#!/usr/bin/env perl # -*- coding: utf-8 -*- #!/usr/bin/perl use strict; use warnings; my %count_of; while ( ) { my @val = split "\t", $_; #my (...1900 days ago
Commands to install conda in Ubuntu !
...DATA, OR PROFITS; OR BU SINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN C O...14.1-py37_0 ... installing: wcwidth-0.1.7-py37_0 ... installing: webencodings-0.5.1-py37_1 ... installing...1510 days ago
Python script to read FASTA and FASTQ file !
# !/usr/bin/env python3 # -*- coding: utf-8 -*- from pysam import FastxFile def read_fasta_q_file(fasta_q_file): """Parse FASTA/Q file using `pysam.Fa...975 days ago