2524 days ago
2800 days ago
CoreTracker, a codon reassignment tracker
CoreTracker detects evidences of codon reassignment from the protein repertoire of a set of genomes by successively applying different algorithms. It’s a filtering approach tha...2496 days ago
3473 days ago
1635 days ago
Bio++ : C Language libraries for your biological need
...as been added in the latest version, these are as follows: Support for codon models (including non-homogen...ce and Site objects, with various Alphabet support (DNA, RNA, Proteins, Codons, any 'Word' of a given size)...3942 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ly 1 download this week → not popular) Input: List of called SNVs and corresponding BAM Output: Report identifying block of mutation within codon (BMCs) mit-o-matic De...2903 days ago
Some useful Bioinformatics links
...m/lh3/fermi Multi-metagenome http://madsalbertsen.github.io/multi-metagenome/docs/step9.html Bandage by rrwick https://rrwick.github.io/Bandage/ Codon Optimization OnLine (COOL): a...2236 days ago
JRF/SRF at University of Calcutta
...e post of Junior Research Fellow in the DBT(DBT Twinning NER) sponsored project entitled “Protein folding kinetics is a selection force on shaping codon usage bias in the high expres...3468 days ago
2911 days ago
2911 days ago
CoreTracker, a codon reassignment tracker
CoreTracker detects evidences of codon reassignment from the protein repertoire of a set of genomes by successively applying different algorithms. It’s a filtering approach that explore all possible reassignments in every genomes from the input set, and retain only the most promising one. ...Tags: CoreTracker, codon, reassignment, tracker
2496 days ago
Generate interactive codon usage plots
Generate interactive codon usage plots as used at ensembl.lepbase.org. The input file format can be generated from an Ensembl database using the export_json.pl script from the easy-import pipeline. live demoTags: Generate, interactive, codon, usage, plots
2252 days ago