Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
If using conda conda create --name perlENV perlconda activate perlENV conda install -c bioconda perl-bundle-bioperl conda install -c bioconda perl-bioperl421 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
Installing in CONDA env You can check using which&...the perl that's located within your conda environment. In this case, it should install things into your conda-directory. When you install...also install most Perl packages via conda. Replace the ':' by '-', lowe...421 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
If you are on Conda, you can try installing cpamn https://anaconda.org/bioconda/perl-app-cpanminus and then cpanm install <name>943 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
# envname is the name of your (existing) conda env conda activate envname # cpanm is available on either conda-forge or # bioconda, so add conda-forge (or...t up bioconda if you need tools # for bioinformatics) conda config --add channels conda-f...1188 days ago
1526 days ago
Comment on "Install snakemake and activate on conda"
conda clean --all1544 days ago
Comment on "Indexcov: fast coverage quality control for whole-genome sequencing"
...ft ➜ falconUnzip_assembly bioconda install goleftzsh: command not found: bioconda➜ falconUnzip_assembly conda i...nment location: /home/urbe/anaconda3 added / updated specs: - g...e --> 2018.8.24-ha4d7672_0 conda-forge certifi: 2018.8.13-py36...2082 days ago
Comment on "Installing Perl environment on Linux"
You migth need to install this sudo conda install -c bioconda perl-app-cpanminus2132 days ago
Comment on "Installing Perl environment on Linux"
If Conda is installed ➜...nment location: /home/urbe/anaconda3/envs/myLocalPerl added / up...readed-5.22.0 | 10 11.2 MB bioconda perl-app-cpanminus-1.7039 | 2...rl-app-cpanminus: 1.7039-2 bioconda perl-threaded: 5.22.0-10 bio...home/urbe/perl5 /home/urbe/anaconda3/envs/myLocalPerl/lib/site_pe...2132 days ago