Results for "contiguity"
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...tered into GAEMR’s analysis pipeline, hence enabling the generation of standard reports. GAEMR’s analysis philosophy is centered on contiguity, correctness, and completenes...2891 days ago
- ...capable of assembling a human genome on a desktop computer in a day. The output of Minia is a set of contigs. Minia produces results of similar contiguity and accuracy to other de Brui...
2714 days ago
CISA: Contig Integrator for Sequence Assembly
...al genomes. A tool, named CISA, has been developed to integrate the assemblies into a hybrid set of contigs, resulting in assemblies of superior contiguity and accuracy, compared with t...2707 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS (Genomic Assemblies Merger for Next Generation Sequencing), whose primary goal is to merge two or more assemblies in order to enhance contiguity and correctness of both. GAM-NGS...2703 days ago
- quickmerge uses a simple concept to improve contiguity of genome assemblies based on long molecule sequences, often with dramatic outcomes. The program uses information from assemblies...
2703 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS is a tool able to merge two or more assemblies in order to improve contiguity and correctness. It can be used on all NGS-based assembly projects and it shows its full potential...2552 days ago
proovread : large-scale high-accuracy PacBio correction through iterative short read consensus
...read : large-scale high-accuracy PacBio correction through iterative short read consensus outperforms PacBioToCA/LSC in terms of accuracy and contiguity/sensitivity (http://dx.doi.or...2321 days ago
ARCS: scaffolding genome drafts with linked reads
...tilizes the barcoding information contained in linked reads to further organize draft genomes into highly contiguous assemblies. We show how the contiguity of an ABySS H.sapiensgen...2260 days ago
fragScaff: Genome Assembly with Contiguity Preserving Transposition
Contiguity preserving transposition and sequen...t of different pools as a source of contiguity information for scaffolding d...ary to Lachesis, providing midrange contiguity to support robust, accurate c...ovo genome assembly via transposase contiguity. Genome Research 2014 De...2192 days ago
SKESA: strategic k-mer extension for scrupulous assemblies
...al genomes sequenced using Illumina. Comparison with SPAdes and MegaHit shows that SKESA produces assemblies that have high sequence quality and contiguity, handles low-level contaminat...2008 days ago
