BBTools for bioinformatician !
...e are removed for each duplicate. dedupe=f optical=t Nothing happens. dedupe=t optical=t Only optical duplicates (those with an X or Y coordinate within dist) are detected. A...2271 days ago
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List of In-silico Binding Site Prediction Tools
...SURFNET: http://www.biochem.ucl.ac.uk/~roman/surfnet/surfnet.html The SURFNET program generates surfaces and void regions between surfaces from coordinate data supplied in a PDB file....3744 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...es, transcripts, and protein sequence; uses SIFT and PolyPhen Input: Coordinates of variants and nucleotide c...gical Reference Repository; “data integration tool that enables coordinate based searches and joins base...2909 days ago
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RA / Research Associate Bioinformatics/Computational Biologist
...ormatics, metabolomics data, managing the project portal, preparing and filing reports etc. Will be expected to communicate with user groups and coordinate with LIMS group in Hyderabad...3356 days ago
Senior Statistician - Manchester or Belfast UK
...p analytical experimental designs for multiplex clinical diagnostic assays in accordance with regulatory requirements (e.g. CLIA, FDA) Lead and coordinate the evaluation of analytical...3229 days ago
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Insert the sequence at desire location in multi-fasta file with Perl
...se File::Copy; #ARGV[0] should be in following format --- Keep the coordinate sorted by name+location #GenomechrName locationStart AlienGene AlienLength # The coordinate should not overlaps --- next...2314 days ago
Perl script to convert GFF 2 FASTA !
#!/usr/bin/perl use strict; use warnings; use Bio::Seq; use Bio::SeqIO; use Bio::DB::Fasta; $| = 1; # Flush output my $outfile_cds = Bio::SeqIO->new( -format...2139 days ago