3428 days ago
3954 days ago
Dynamic chromosome breakpoints !!!
...o type, the first one is numerical abnormalities where severe disorders are caused by the loss or gain of whole chromosomes, which affect the copy number of hundreds or even th...3567 days ago
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2932 days ago
Bio++ : C Language libraries for your biological need
...vol Biol. 2008 Sep 22;8(1):255Dutheil J, Gaillard S, Bazin E, Glémin S, Ranwez V, Galtier N, B...ep;183(1):259-74.Nabholz B, Mauffrey J-F, Bazin E, Galtier N, Glémin S. Determination of Mitoc...3962 days ago
3716 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...recombination patterns over large genomic regions under various demographic models http://cmpg.unibe.ch/software/simcoal2/SimCopy An R package simulating the evolution of copy number profiles along a tree....3752 days ago
Commercial and public next-gen-seq (NGS) software
...A-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Number, Allele-Specific Copy Number, LOH, Association, Tri...ir Science publication CNV-Seq - CNV-seq, a new method to detect copy number variation using high-t...3533 days ago
BCIL Bioinformatics BITP Application !!
...2015. After registering the online application you need to take the hard copy of it and send through post....for this program they can apply through online mode. Then send the hard copy of registered application for...3321 days ago
2324 days ago
Bioinformatics PhD studentship available in New Zealand
...r the post, please send a cover letter stating your interest in the position and why you think you would be a good candidate, a Curriculum Vitae, a copy of your academic transcript,...3962 days ago
STUDENTSHIP and TRAINEESHIP @ University of Madras
...ormatics/Biophysics/ Life sciences/others Duration : 2-3 Months Mail your CV on or before 25th November 2013 to shirai2011@gmail.com and hard copy to "Dr. D. Velmurugan, Profes...3837 days ago
Golden Rules of Bioinformatics
All constant are variable. Copy and paste is a genetic error. First solve the problem, then write the code. No matter what goes wrong, it will probably look right. Any simple p...3930 days ago
How Genes are Regulated: Transcription Factors
Each cell in our body inherits the same master copy of DNA, but different cell types use it differently. Transcription Factors help influence which genes are used in which cell. Unde...3909 days ago
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2159 days ago
Reformat the file names with Perl
#!/usr/bin/perl use strict; use warnings; use File::Copy qw(copy);; $| = 1; my %hash; my @files = glob...me[0]}{code}"."_$pName[1]"."."."scf"; if ( -f "$files[$_].scf" ) { copy("$files[$_].scf", $newName) o...2350 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...igate the ways of how other researcher employed that language in their researches and WHY? A researcher, in this field, should never create and use copy paste scripts but always must...2377 days ago
PureCN: copy number calling and SNV classification using targeted short read sequencing
This package estimates tumor purity, copy number, and loss of heterozygosity (LOH), and classifies single nucleotide variants (SNVs) by somatic status and clonality. PureCN is designed for targeted short read sequencing data, integrates well with standard somatic variant detection and copy number...Tags: PureCN, copy, number, calling, SNV, classification, targeted, short, read, sequencing
2111 days ago
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing data. EXCAVATOR combines a three-step normalization procedure with a novel heterogeneous hidden Markov model algorithm and a calling method that classifies genomic regions into five copy number states. We vali...Tags: EXCAVATOR, detect, copy, number, variants, whole-exome, sequencing, data
1963 days ago
Comment on "Install composer for ELGG"
php -r "copy('https://getcomposer.org/installer', 'composer-setup.php');" php -r "if (hash_file('sha384', 'composer-setup.php') === '906a84df04cea2aa72f40b5f787e49f22d4c2...917 days ago
Comment on "Far Manager Commands and Links !"
...and archives, namely: F1- add files to archive F2- extract files from archive F3- execute archive management commands F4- edit new file F5- copy the file under the cursor F6...955 days ago