Useful Bioinformatics Analysis Tools !
...g solution for raw sequencing data, Bioinformatics, 20... FQSqueezer: k-mer-based compression of sequencing data, Scientific Reports, 2020;...Roguski, L., Disk-based compression of data from genome sequencing, Bioinfo...862 days ago
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List of comparative genomics resources !
3D-GENOMICS -- A Database to Compare Structural and Functional...coDing Orthologous Regions A database resource of developmental...arative Genometrics (CG) -- a database dedicated to biometric co...MBGD -- Microbial genome database for comparative analysis...hensive suite of programs and databases f...676 days ago
Understanding DUMP files from NCBI Taxonomy database !
*.dmp files are bcp-like dump from GenBank taxonomy database General information. Fi...- node id in GenBank taxonomy database parent tax_id --...t node id in GenBank taxonomy database rank -- rank of t...this subtree has no sequence data yet comments -- free-...659 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/watch?v=s3JldKoA0zw Thi...lse 3. Common-sense approaches to sharing tabular data alongside publication ht...e/article/pii/S2666389921002300 4. A Reproducible Data Analys...540 days ago
Common steps for reads mapping !
Mapping reads to a reference genome is an essential...that is appropriate for your type of data and research question. I...indexing tools. Prepare the read data: The reads should be in a for...pically involves specifying the input data, refer...422 days ago
Calculate the significance of the difference between two trends
To calculate the significance of the difference between two trends, you can use a...le H1 might be that there is a significant difference. Collect data on the two trends. Make sure that the data is ind...417 days ago
Free Books on Machine Learning and Artificial Intelligent !
An Introduction to Statistical LearningThis book provides a broad and...wishes to use contemporary tools for data analysis. https://hastie.su....ains/ISLR2/ISLRv2_website.pdf Python Data Science HandbookYou’ll...aning, manipulating, and transforming data &mdash...415 days ago