How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl module...use "yum" for the rescue. Dont worry biological data cruncher, this is true we are...scanning (atstart or never)? [atstart]Cache metadata (yes/no)...3951 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a...3951 days ago
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3946 days ago
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Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did...3953 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha hel...re topology for 77% of the sequences in a standard dataset of 86 proteins with superv...tlab Conclusion/Implementation: Here discriminant data mining a...3945 days ago
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used...t to Bio-informatics work that is math heavy and deals with a large amount of data.3952 days ago
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Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer dow...Access), allowing you to fetch public databases like GenBank, EMBL or Sw...genetics and molecular evolution Data structure and IO Phylogeneti...ks with Function objects).Statistics: DataTable obj...3948 days ago
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R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This al...3940 days ago
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a netwo...lyze Next Generation Sequencing (NGS) data analysis. In the context of a...rder to ensure compliance of produced datasets with pipelines requiremen...ional facilities and expertise in NGS data analysis...3949 days ago
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Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like thi...Gene se Genome tak. Maine BLAST kiya. NCBI wale Data le jayenge Raju ban ga...To Hona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Database Sear...3919 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician would love to change the...es. I'm BioGeek. Fedup with LIPS, try God script. Idiot, Go ahead, make my data! Thank...3721 days ago
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data Air date: Wednesday, February 01,...onential increase in genomic and biomedical data, which will soon outstrip adv.... Extracting new science from these massive datasets will...3902 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a...to certain lifestyle-related diseases, by understanding their personal genome data. So, I t...3917 days ago
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Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has...d().split("\n")[1:] allseq[nm] = ''.join(dna) import json with open("data/allseq.j...1137 days ago
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand. An explosion in biological data has resulted from genome proj...ics provides the tools to analyse and exploit such data sets.Can...3417 days ago
At what age did you gain passion in Bioinformatics?
Most of the bioinformatician were biologist ( yeah ... not all ;), and at later stage they gain a passion in Bioinformatics and learn it. When did you get inclined towards computational analysis of biological data?3239 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of G...ting the globally produced biological data to derivate unified solutions...rison of high-throughput experimental data in an integrated manner and b...m? With the increasing amount of data in datab...2362 days ago
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Comment on "Sibelia: A comparative genomics tool"
...tive diagram (see section "d3" visualization"). The blocks are al...Circos" (see section "Circos" visualization"). While "Circos" is better f...orary files and store all it's data in RAM. Output description =======..."blocks_sequences.sam". "d3" visualization ------------------ File nam...1285 days ago
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