Results for "data visualization"
Top-level pages
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be execu...endif 5. Larger example: NOTE: NEVER ANY DATA DECLARATIONS IN PSEUDOCODE...scussed ahead) in your pseudocode. Do not include data declarat...2656 days ago
Quick next generation sequencing (NGS) terms definition
fragment size: the Illumina WGS protocol generates paired-end reads from both ends of longer fragments. The...refore the fragment size distribution can be learned empirically for each WGS data set sepa...2520 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and softwar...nbsp;- Perl binding for Redis database pplu/aws-sdk-perl -...open source repository garu/Data-Printer - colored pretty...ver for the MySQL and MariaDB databases beide/Bootimg-scripts&n...plication that serves KeePass database entr...2487 days ago
- It is often necessary to import sample textbook data into R before you start worki...system. > library(gdata) ...k = loadWorkbook("mydata.xls") > df ...ocumentation > mydata = read.spss("myfile...
2487 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated from two different ancestors. ancest...of coding sequences, for discovery of new genes and (by reference to sequence data banks) f...2460 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment for rap...ference sequences and RNA-seq data (k-mer based) Software (C++)...of transcripts using RNA-seq data (uses k-mers) https://c...aplogroup classifier from NGS data (k-mer based) Software (Pyth...2369 days ago
- When you have both Illumina and Nanopore data, then SPAdes remains a good o...equired for MDA (single-cell) data --meta this...quired for metagenomic sample data --rna this...bling Advanced options: --dataset <filename>...
2349 days ago
Single Cell RNAseq data analysis tutorial !!
...useful links: Single Cell RNAseq data analysis Tutorial A step-by-...l analysis of single-cell RNA-seq data A step-by-step workflow for...ls applied to single-cell RNA-seq data separate biological drivers f...https://github.com/zji90/TSCAN Visualization and cellular hierarchy infere...2348 days ago
- ...all of the major steps in RNA-seq data analysis, including experimen...on of gene and transcript levels, visualization, differential gene e...vey of best practices for RNA-seq data analysis RNA-seq workflow: g...RNA-Seq exercise An open RNA-Seq data analysis pipeline tutorial with an exa...
2348 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED database and provides detailed...capable of processing a larger data volume. NCBI's annotati...numbers to the user's sequence data by BLAST searches, respective...chine and supported by updated databases wil...2329 days ago
