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Results for "denovo"

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• • ruchira@ruce_now

  

  Annotating a sequence not yet published

  I have 198,991 bp long sequence. I ran it through Maker, Glimmer and GeneMarkS. All three gave me different number of predicted genes.Here I am talking about genes that I got through GeneMarkS.Now when I am using BlastX to find the similar genes, I sometimes get highly dissimilar results. What do...

  Tags: denovo, Annotation

  3646 days ago

• • BioStar@biostar

  

  NxRepair: error correction in de novo assemblies using Nextera Mate Pair Reads

  NxRepair is a python module that automatically detects large structural errors in de novo assemblies using Nextera mate pair reads. The decector will break a contig at the site of an identified misassembly and will generate a new fasta file containing both the corrected contigs and the correct, u...

  Tags: NxRepair, error, correction, denovo, assembly, Nextera, Mate, Pair, Reads

  1924 days ago

• • Jitendra Narayan@admin

  

  De novo genome assembly: what every biologist should know http://www.nature.com/nmeth/journal/v9/n4/full/nmeth.1935.html #NGS #Assembly #Genome #Sequencing #DeNovo

  Tags: NGS, Assembly, Genome, Sequencing, DeNovo

  3483 days ago

• • Rahul Nayak@rahul

  

  De novo genome assembly https://astrobiomike.github.io/genomics/de_novo_assembly #Genome #Assembly #DeNovo #Genome

  Tags: Genome, Assembly, DeNovo, Genome

  1896 days ago

• • Abhimanyu Singh@abhimanyu

  

  De novo Gene Birth https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1008160 #Gene #Birth #Denovo

  Tags: Gene, Birth, Denovo

  1803 days ago