BOL: Results for "detects"

Results for "detects"

- Archana Malhotra@archana
Software and Tools to detect structure variation with long reads !!
...er using third generation sequencing Sniffles is a structural variation caller using third generation sequencing (PacBio or Oxford Nanopore). It detects all types of SVs using eviden...
2622 days ago
- Jit@jit.aber
Ancestral sequence reconstruction (ASR) or ancestral gene/sequence reconstruction/resurrection tools to study molecular evolution
...of synteny blocks at the extremities of the progressively assembled CARs. The method starts with a set of blocks as the initial set of CARs, and detects iteratively the potential anc...
2545 days ago

- Robert M Willioms@robert
Software developed in pevsner lab
...of SNP Data pediSNP: Analyze SNP Data From a Pedigree of Two Generations kcoeff: Calculate Cotterman Coefficients of SNP Genotype Data triPOD: Detects chromosomal abnormalities in...
3513 days ago
- Jit@jit.aber
YAHA
...uery using a biologically relevant breakpoint penalty. YAHA can also report multiple mappings per defined segment of the query. We show that YAHA detects more breakpoints in less time...
2676 days ago
+9 more Bookmarks

- Shikha Logwani@shikha
List of In-silico Binding Site Prediction Tools
...ructural conservation. Results: An algorithm, ProBiS is described that detects structurally similar sites on...he query protein to members of a database of protein 3D structures and detects with sub-residue precision, s...
3758 days ago
- Surabhi Chaudhary@surabhi
Commercial and public next-gen-seq (NGS) software
...e-bio.sourceforge.net/) designed for fast mapping of Illumina reads SNP/Indel Discovery ssahaSNP - ssahaSNP is a polymorphism detection tool. It detects homozygous SNPs and indels by...
3533 days ago
+2 more Top-level pages

- Shruti Paniwala@shruti
Scalpel
...reads that map to that exon (including partial matches), splits them into k-mers, and creates a de Bruijn graph to span the exon; however, if it detects repeats in the map, it iterat...
3561 days ago
- LEGE@lege
Cleaner BLAST Databases for More Accurate Results
...t nucleotide (nt) and protein (nr) BLAST databases. Foreign Contamination Screen tool for genome cross-species screening (FCS-GX) detects contamination from foreign or...
27 days ago

- Jitendra Narayan@admin
The Mills lab
...abnormally mapped pairs of clone ends; (ii) read-depth analysis, which detects deletions and duplications th...alysis of the read depth-of-coverage; (iii) split read analysis, which detects SVs by evaluating gapped sequ...
3007 days ago