Results for "discordant read pairs"
Blogs
String graph based genome assembly software and tools !
In graph theory, a string graph&...enomes from high coverage short read data. SGA is designed as a mo...ects base calling errors in the reads. The second phase assembles...for more accurate estimation of read copy counts, and the improved use of mate pairs and min-cost flow for support...2343 days ago
Letter of motivation for bioinformatics applicants !
A motivation letter, or sometimes called letter of motivation or motivati...my graduation days, I know even after reading many instructions I was no...sion and reference. None would want to read you unless he knows what it i...can be done by one thing and that is -readi...2340 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time device for DNA and RNA&nbs...equence data. Ultra-long read lengths are possible (hundred...advantages of ONT data is the read length, which offers great pr...pper for long and error-prone readshttps://github.com/isovic/gra...ithub.com/jts/nanocorrect/ npReade...2335 days ago
How custom essay writing service work to provide essay papers that meets customers need?
Writing is more effective way to learn than reading. While writing you get more information and he...ized to their subject. This writer will carefully read through the requirements and...the paper ,also provide time for the paper to be read...2304 days ago
BBTools for bioinformatician !
BBMap.sh Mapping Nanopore reads BBMap.sh has a length cap of 6kbp. Reads longer than this will be br...s the combined scores of read pairs - pairs are always kept together). B...(can be mapped concordant or discordant, doesn't matter) are sha...2285 days ago
Basic command-line to run BLAST
The goal of this tutorial is to run you...ax_target_seqs num_sequences] [-num_threads int_value] [-ungapped] [-rem...e referred to as high-scoring segment pairs (HSPs). less cow_vs_hum...ax_target_seqs num_sequences] [-num_threads int_value] [-remote] [-versio...2258 days ago
- ...-c ./analysis/BreakTransByPairs.cc -o obj/analysis/BreakTransByPairs.o ./analysis/BreakTransByPa...bleUpClustering.o -L. -lm -pthread -l_BubbleUpClustering_temp...-c ./analysis/JoinTransByPairs.cc -o obj/analysis/JoinTransB...s_MPI_chang_temp /bin/rm lib_ReadsToTranscripts_MPI_chang_temp.a...
2147 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that is widespread and has, or is conjectured to...Structurally Analogous Motifs Database containing pairs of structural analogs and the...2007 days ago
Understating pacbio reads name !
m140415_143853_42175_c100635972550000001823121909121417_s1_p0/553/3100_11230 0.99 24 └1┘└─────2─────┘...sually "p0", "X0" when using expired reagents) ZMW hole number Subread Region (start_stop using polymerase read...2004 days ago
CANU genome assembly parameters !
Choose the appropriate parameters to run Canu and run it. The as...o cores (parameter -maxThreads=2) and you would like to dis...|m|k] \ -maxThreads=2 \ useGrid=...genomeSize=2m \ -maxThreads=2 useGrid=false \ -pac...s. More at https://canu.readt...1959 days ago
