Results for "element"
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MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
...t the growing interest in larger structural variant (SV) discovery, MOSAIK provides explicit support for handling known-sequence SVs, e.g. mobile element insertions (MEIs) as well as...2921 days ago
- ...Modeler are two de-novo repeat finding programs ( RECON and RepeatScout ) which employ complementary computational methods for identifying repeat element boundaries and family relatio...
2831 days ago
- ...activity without requiring round-trips to servers and without plugins. GoJS normally runs completely in the browser, rendering to an HTML5 Canvas element or SVG without any server-sid...
2735 days ago
Many-Core Engine (MCE) for Perl example
...s a pool of workers and therefore does not fork a new process per each element of data. Instead, MCE follows...ers. MCE enhances that model by adding the ability to chunk the next n elements from the input stream to the...2665 days ago
- ...the effective representation of associated data, such as the number of elements in the aggregates and inters...tions, as well as additional summary statistics derived from subset or element attributes. To begin, input...
2592 days ago
HTTDB - Horizontally transferred transposable elements database
Transposons or Transposable elements (TEs) are "mobile genes" capable of mobilization from one genomic loca...first discovered by Daniels et al. (1984) when analysing a P element that was transferred from&nbs...2308 days ago
UpSetR: An R Package for the Visualization of Intersecting Sets and their Properties
...the effective representation of associated data, such as the number of elements in the aggregates and inters...tions, as well as additional summary statistics derived from subset or element attributes. For further deta...1938 days ago
chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
...omal regions allowing users to map chromosome elements (like genes,SNPs etc.) on th...ously on the same plot. annotating groups of elements as distinct colors. creatin...labels to the plot adding hyperlinks to each element...1716 days ago
RepeatModeler2: automated genomic discovery of transposable element families
RepeatModeler2 represents a valuable addition to the genome annotation toolkit that will enhance the identification and study of TEs in eukaryotic genome sequences. Rep...1630 days ago
- an integrated bioinformatics pipeline for the detection of TE insertions in whole-genome shotgun data, called McClintock (https://github.com/bergmanlab/mcclintock), whi...
1300 days ago
