Results for "error correction"
Top-level pages
Data mining, the extraction of hidden predictive information from large databases. Data mining is becoming an inc...Regression - Attempts to find a function which models the data with the least error. As...3957 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ty assessment, filtering, and correction SolexaQA: At-a-glance q...: quality-aware detection and correction of sequencing errors. Kelley et al, Genome Biol 1...ral Correction of sequencing errors in a mixed set of reads. Salmela,...ting or are simply sequencing errors - the authors stand by their conc...3790 days ago
Commercial and public next-gen-seq (NGS) software
...mith Genome Sciences Centre. Perl/Linux. SOAPdenovo - Part of the SOAP suite. See above. VCAKE - De novo assembly of short reads with robust error correction. An improvement on early vers...3530 days ago
Software packages for next gen sequence analysis
...Genome Sciences Centre. Perl/Linux. * SOAPdenovo - Part of the SOAP suite. See above. * VCAKE - De novo assembly of short reads with robust error correction. An improvement on early vers...3253 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...e SNPs and indels from sequencing and mapping errors, last update January 2013 I...ion, AlignmentBase, Call ,SecondBase, CenteredErrorPrc, ReferenceErrorPrc, Second...m; detects somatic SNVs with multiple testing correction, uses Fisher’s exact te...2920 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a...the assembly in a model encompaasing error rate, insert length and other...ol that aims to identify the assembly errors with high accuracy in an unb...ijn graph by decomposing reads within error-pron...2697 days ago
Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Subroutine parameters. $a$b...t Accumulator Status Reporting $? Child error. Status code of most recent system call or pipe. $! Operating System Error. (Wh...2655 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTuner...ssibly noisy) audio and is robust to transcription errors. It is mainly written as a p...rsed results. Formerly known as bounceHammer 4: an error mail...2500 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...(OLC) approach without the necessity of an error correction stage (uses minimap) So...sm LINKS Scaffolding genome assembly with error-containing long sequence (e.g., ON...it/~ciompin/main/qcluster.html Reads error correction Lighter Correction of seque...2382 days ago
- ...with trusted contigs --untrusted-contigs <filename> file with untrusted contigs Pipeline options: --only-error-correction runs only read error correction (without assembling) --only-...
2362 days ago
