Results for "file"
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Stand-alone programs for Bioinformatician
...e bigBed and bigWig applications see:http://genome.ucsc.edu/goldenPath/help/bigBed.htmlhttp://genome.ucsc.edu/goldenPath/help/bigWig.html View the file 'FOOTER' to see the usage sta...2920 days ago
- ...rimental data cover both high throughput datasets and individiual focused studies. All interaction data are freely available in a standardized file format. Records can be querie...
2877 days ago
- ...mon thread for the manual improvement of scaffolds. Description WiseScaffolder includes 4 subcommands: dumpconfig generates a configuration file that notably specifies the av...
2868 days ago
- ...a program for convenient conversion of genome coordinates (or annotation files) between different asse...Cv37) <> mm10 (GRCm38)). It supports most commonly used file formats including SAM/BAM, Wi...
2814 days ago
- OrganellarGenomeDRAW is dedicated to convert genetic information stored in GenBank entries to graphical maps. The input text file has to be in GenBank flat file format, whereas the output form...
2834 days ago
- Before uploading a data file, check the samples gallery to make sure that your data format is compatible. Your file must be plain text. You...
2817 days ago
CGView - Circular Genome Viewer
...an-and-zoom interface, or GView can write static images of a genome to a file. GView can draw a genome usin...r later use or for application to other genome maps using GView's custom file format.2800 days ago
BLAST Ring Image Generator (BRIG)
...uences as concentric rings. BRIG will perform all BLAST comparisons and file parsing automatically via a s...unassembled sequence data. BRIG also accepts SAM-formatted read-mapping files enabling genomic regions pre...2788 days ago
- ...reformatted and it is being expanded to include more information. There are common options for most BBMap suite programs and depending on the file extension the input/output fo...
2779 days ago
- ...ocess with empirical error models or quality profiles summarized from large recali...s using user own read error model or quality profiles. ART supports simulation of...ate alignments in the SAM alignment or UCSC BED file format. ART can be used toget...
2755 days ago
