snakepipes: A toolkit based on snakemake and python for analysis of NGS data
snakePipes are flexible and powerful workflows built using snakemake that simplify the analysis of NGS data. DNA-mapping* ChIP-seq* RNA-seq* ATAC-seq* scRNA-se...1796 days ago
GPOPSIM: a simulation tool for whole-genome genetic data
...tool for pedigree, phenotypes, and genomic data, with a variety of population and genome structures and trait genetic architectures. It provides flexible parameter settings for a wide...2294 days ago
Mobyle: a new full web bioinformatics framework
Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data management features that allow the us...2303 days ago
Epiviz: an interactive visualization tool for functional genomics data.
...user-supplied visualizations. It also includes data from the Gene Expression Barcode project for transcriptome visualization. It has a flexible plugin framework so users can...2120 days ago
gSearch: a fast and flexible general search tool for whole-genome sequencing
gSearch compares sequence variants in the Genome Variation Format (GVF) or Variant Call Format (VCF) with a pre-compiled annotation or with variants in other genomes. Its search algorithms are subsequently optimized and implemented in a multi-threaded manner.2092 days ago
SeqMonk:A tool to visualise and analyse high throughput mapped sequence data
...data (BAM/SAM/bowtie etc) Creation of data groups for visualisation and analysis Visualisation of mapped regions against an annotated genome. Flexible quantitation of the mapped da...2057 days ago
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Quick tour of Genetic Algorithms !
The R package GA provides a collection of general purpose functions for optimization using genetic algorithms. The package includes a flexible set of tools for implementing g...1929 days ago
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