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Results for "gatk"

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• • Jit@jit.aber

  

  #GATK and #Picard to filter low quality variants https://insidedna.me/tutorials/view/gatk-picard-filter-vcf-variants-snp

  Tags: GATK, Picard

  2860 days ago

• • Neelam Jha@neelam

  

  GATK is open source https://software.broadinstitute.org/gatk/ #GATK #Broad

  Tags: GATK, Broad

  2043 days ago

• • Rahul Nayak@rahul

  

  Analyse your sample with GATK pipeline. https://app.terra.bio/ #GATK

  Tags: GATK

  1555 days ago

• • BioStar@biostar

  

  #Genome #Analysis #Toolkit #Variant Discovery in High-Throughput #Sequencing Data https://gatk.broadinstitute.org/hc/en-us #GATK

  Tags: Genome, Analysis, Toolkit, Variant, Sequencing, GATK

  1536 days ago

• • biogeek@biogeek

  

  (grep ^"#" in.gff; grep -v ^"#" in.gff | sort -k1,1 -k4,4n) | bgzip > sorted.gff.gz; tabix -p gff sorted.gff.gz; #GATK

  Tags: GATK

  1536 days ago

• • biogeek@biogeek

  

  Useful bioinformatics database for GATK analysis ftp://ftp.broadinstitute.org/bundle/hg38/ #GATK #Database

  Tags: GATK, Database

  1534 days ago

• • biogeek@biogeek

  

  Best Practices for Variant Calling with the GATK

  The presentations below were filmed during the March 2015 GATK Workshop, part of the BroadE Workshop series. At the time of this workshop, the current version of Broad’s Genome Analysis Toolkit (GATK) was version 3.3. Genome Analysis Toolkit 0...

  Tags: Best, Practices, Variant, Calling, GATK

  1534 days ago