EGAD: Ultra-fast functional analysis of gene networks
...ands of functional groups to be accomplished in minutes in cross-validation and an analytic determination of the optimal prior to guess candidates genes across multiple functional se...1982 days ago
FGENESH - Program for predicting multiple genes in genomic DNA sequences
FGENESH is the fastest (50-100 times faster than GenScan) and most accurate gene find...02) Science 296:79) and was used to produce 87% of all high-evidence predicted genes (Goff et al. (2002) Scie...1976 days ago
GeneOverlap: An R package to test and visualize gene overlaps
...and its genome-wide enrichment can be mapped by using ChIP-seq experiments. Because of its activating role, if we overlap the genes that are bound by H3K4me3 with the genes that are highly expressed, we...1968 days ago
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Apollo: First instantaneous, collaborative genomic annotation editor available on the Web
Apollo is a plug-in for the JBrowse Genome Viewer. In addition to genes and pseudogenes, users can annotate ncRNAs (snRNA, snoRNA, tRNA, rRNA), miRNAs, repeat regions, and trans...1813 days ago
FUMA GWAS: Functional Mapping and Annotation of Genome-Wide Association Studies
...ied by lead SNPs. The GENE2FUNC function takes a list of gene IDs (as identified by SNP2GENE or as provided manually) and annotates genes in biological context1813 days ago
chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
...or chromosomal regions allowing users to map chromosome elements (like genes,SNPs etc.) on the chromosome.... adjusting chromosome range or visualizing chromosome regions such as genes adding labels to the plot a...1715 days ago
GEO2R: compare two or more groups of Samples
GEO2R to compare two or more groups of Samples in order to identify genes that are differentially expressed across experimental conditions.1245 days ago