Results for "genome letters"
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Popular bioinformatics educational resources !
Followings are the list of popular bioinformatics educational resources Bii.a-star.edu...nology, Finland. Ornl.gov/sci/techresources/Human_Genome/education/education.shtml A...resource for introductory information on the Human Genome...2187 days ago
- LiftOver is a necesary step to bring all genetical analysis to the same reference b...iftOver can have three use cases: (1) Convert genome position from one genome assembly to another genome as...er from one build to another (3) Convert both genome...
2155 days ago
- Download this https://github.com/trinityrnaseq/trinityrnaseq/releases/tag/Trinity-v2.6.6 ➜ cd trinityrnase...meter **, this functionality continues to be under development) # # --genome_guided_bam :genome...
2128 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that is widespread and has, or is co...tes. PEDANT -- Protein Extraction, Description and ANalysis Tool Conduct genome...1988 days ago
CANU genome assembly parameters !
Choose the appropriate parameters to run Canu and run it. The assembly will take about...-p \ -d \ genomeSize=[g|m|k] \.... canu -p test_asmbl \ -d asm_test3 \ genomeS...1940 days ago
List of tools frequently used while genome assembly
List of tools frequently used while genome assembly: I have used the following assemblers Spades (v. 3.10.1)...18) Nanopolish (v. 0.8.3) I have used the following tools to assess genome...1925 days ago
Perl one-liner for beginners !
I often use the following arguments to perl: -e Makes...nd only print words that do not have any uppercase letters. perl -ne 'print un...a-zA-Z\s]*//g' text_withSpecial.txt > text_lettersOnly.txt perl -...1376 days ago
Software for genome assembly !
List of bioinformatics tools/Software Website References for genome assembly: 1 Falcon https://github.com/PacificBiosciences/pb-assembly 2 Canu assembler http://canu.readthedocs...1339 days ago
10 NGS services companies around the globe !
The global NGS services market is expected to reach USD 13.1 bil...on systems. The company’s genome services are suitable for cus...eration sequencing services including genomes, targeted (re)-sequencing, h...n India. Popular mentions – MedGenome...1254 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling...; algorithm that leverages a pangenome reference built from haplotype-resolved genome assemblies in conjunction wit...riptome data (Richard Kuo @GenomeRIK)● pbaa (PacBio A...long transcriptomic reads to a genome,...987 days ago
