Results for "go"
Bio-Scripts
Installing Porechop on Ubuntu !
..._threshold MIDDLE_THRESHOLD] [--extra_middle_trim_good_side EXTRA_MIDDLE_TRIM_GOOD_SIDE] [--e...(default: 85.0) --extra_middle_trim_good_side EXTRA_MIDDLE_TRIM_GOOD...2103 days ago
Install Python locally on shared Linux server !
...ll use the default python of #the system. We are going to update the environment...source ~/.bashrc_profile #You might need to logout and login again for the env...ion by the command source ~/.bashrc_profile or logout and login. Then, check if p...2095 days ago
- ...1e8-8de3-124a69f123c8?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-C...GCS: run using Google cloud dataproc...ng directory into various categories. CollectHsMetrics (P...copy a file or directory from Google Cloud Storage into the HD...
2072 days ago
- ...gins/globalias/README.md | 2 +- plugins/golang/golang.plugin.zsh.../twitter.com/ohmyzsh Get your Oh My Zsh swag at: https://shop.planetargon.com/ ➜
2071 days ago
Generate simulated polyploid genome !
...bar -point 4 -count 16558 toy.fasta > toyheterozygous3percent.fasta #Cat both...toy.fasta toymutated3percent.fasta > toyheterozygous3percent.fasta #generated...ired-end reads sim_reads --depth 50 toyheterozygous3percent.fasta > toyheterozy...2050 days ago
Perl script to reverse complement a DNA sequence !
...$revcom =~ s/G/C/g; $revcom =~ s/C/G/g; print "Here is the reverse complement DNA: WRONG:\n\n"; print "$revcom\n"; print "\nThat was a bad algorithm, and the reverse complem...2040 days ago
Installing pb-assembly on Linux !
...libxml2/2.9.0-goolf-1.4.10 binutils/2.28-GCCc...18-GCCcore-6.4.0 bzip2/1.0.6-goalf-1.1.0-no-OFED...3.3-GCCcore-6.4.0 FFTW/3.3.4-gompi-2016b...ScaLAPACK/1.8.0-gompi-1.1.0-no-OFED-ATLAS-3.8.4-...2031 days ago
- ...5be.s3.amazonaws.com/4339773/f2f10d8a-8a73-11e8-89f4-07e1d9d77b17?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-C...5be.s3.amazonaws.com/4339773/f2f10d8a-8a73-11e8-89f4-07e1d9d77b17?X-Amz-Algorithm=AWS4-HMAC-SHA256&X-Amz-C...
2016 days ago
- Download page https://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download...+ CentOS # download latest BLAST version wget ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LAT...
1758 days ago
Bash script to download SRA file !
...we get two files, one for the first and second mate in each pair. We'll use them in this format when aligning. wget ftp://ftp-trace.ncbi.nlm.nih.gov/sra/sra instant/reads/ByRun/...1556 days ago
