CBS Comparative Microbial Genomics group - BioTools download page
he CMG-biotools system presents a stand-alone interface for comparative microbial...rough the open source Ubuntu project. The system can be installed on a virtual computer, allowing the user to run the...2087 days ago
MimicrEE2: Genome-wide forward simulations of Evolve and Resequencing studies
MimicrEE2, a multi-threaded Java program for genome-wide forward simulations of evo...els (selective sweeps, polygenic adaptation, epistasis). MimicrEE2 runs on any computer with Java installed. It is di...2051 days ago
EvidentialGene: tr2aacds, mRNA Transcript Assembly Software
Quality assessment of this mRNA Transcript Assembly Software is described in EvidentialGene_quality. Too ma...ant, and now the only way to get it is to produce way too many assemblies on a good RNA...2048 days ago
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Deepbinner: a signal-level demultiplexer for Oxford Nanopore reads
Deepbinner is a tool for demultiplexing barcoded Oxford Nanopore sequenci...ds not the raw fast5 files (which Deepbinner requires). You have a small/slow computer. Deepbinner is more computati...1991 days ago
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GenoViz: Visualization software for genomics
GenoViz provides software applications and re-usable components for data visualizat...new releases of IGB as compiled code (igb.zip) you can use to run IGB on your computer. If you have questions,...1955 days ago
kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
kallisto is a program for quantifying abundances of transcripts from bulk and...sp;can quantify 30 million human reads in less than 3 minutes on a Mac desktop computer using only the read sequences...1950 days ago
molinspiration: broad range of cheminformatics software tools supporting molecule manipulation
Molinspiration offers broad range of cheminformatics software tools suppo...nspiration tools are written in Java, therefore can be used practically on any computer platform.1937 days ago
RaGOO: Fast Reference-Guided Scaffolding of Genome Assembly Contigs
Alonge M, Soyk S, Ramakrishnan S, Wang X, Goodwin S, Sedlazeck FJ, Lippman ZB, Schatz MC: Fast and accurate reference...f this tool is on practicality and therefore has the following features: Good per...1849 days ago