Results for "installed"
Bio-Scripts
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
...t; use warnings; use ExtUtils::Installed; use LWP::Simple; use Archi...l the required modules have been installed in the system and download th...); my ($inst) = ExtUtils::Installed->new(); my (@installed_m...ho -e "exists \t blastDB, If not installed sucessfully, delete the folde...1175 days ago
- #use strict; use warnings; use ExtUtils::Installed; use LWP::Simple; use Archive...check if all the required modules have been installed in the system and download th...', ); my ($inst) = ExtUtils::Installed->new(); my (@installed_m...
1173 days ago
Perl script to check modules installed !
#use strict; use warnings; use ExtUtils::Installed; # # First, check if all the required modules have been installed in the system # BEGIN {...', ); my ($inst) = ExtUtils::Installed->new(); my (@installed_m...1170 days ago
- (JitMetaENV) ➜ setu git:(master) ✗ conda install -c bioconda ragout Collecting package metadata (current_repodata.json): done Solving environment: failed with initial...
1163 days ago
Install assembly-stat using conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda assembly-stats Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1069 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda ragout Collecting package metadata (current_repodata.json): done Solving environment:...
1069 days ago
- vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda spades Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1069 days ago
- ...wing additional packages will be installed: autoconf automake autopoi...e following NEW packages will be installed: autoconf automake autopoi...lib1g-dev 0 upgraded, 106 newly installed, 0 to remove and 0 not upgrad...files and directories currently installed.) Preparing to unpack .../00...
1069 days ago
Install trimmomatic using Conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda trimmomatic Collecting package metadata (current_repodata.json): done Solving environ...1069 days ago
Install grabseqs using conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1069 days ago
