How to install Perl modules manually, using CPAN command, and other quick ways
...or message. In this example, XML::Parser Perl module is missing. Can't locate XML/parser.pm in @INC (@INC c...stalled.# cpan-bash: cpan: command not found# perl -MCPAN -e shellCan't locate CPAN.pm in @INC (@INC contain...3965 days ago
REAPR: a universal tool for genome assembly evaluation
...d paired reads mapped to the assembly in a BAM file. Mapping information such as the fragment coverage and insert size distribution is analysed to locate mis-assemblies. REAPR works b...2965 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...ess. Accuracy: Prodigal is a highly accurate gene finder. It correctly locates the 3' end of every gene in...sophisticated ribosomal binding site scoring system that enables it to locate the translation initiation si...2699 days ago
Find certain files/documents in Linux OS
...ch command is required. The Linux Find Command is one of the most important and much used command in Linux sytems. Find command used to search and locate list of files and directories...3696 days ago
Awesome perl frameworks, libraries and software - PART 2
...he user. Leont/file-map - Memory mapping for Perl kuzuha/WWW-Pixiv - Perl interface for www.pixiv.net jozef/Debian-Apt-PM - locate Perl Modules in Debian reposi...2509 days ago
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Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...n command | grep pattern — search for pattern in the output of command find file — find all instances of file in real system locate file — find all in...2295 days ago
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Comment on "Sibelia: A comparative genomics tool"
...sequence. If an instance of a synteny block is located on the positive strand, the...he FASTA sequence where the block instance is located. Other fields are described...a" keeps track of all changes so it is able to locate original locations of the sy...1300 days ago
Comment on "Installing Perl environment on Linux"
...KSuccessfully installed Parallel-ForkManager-1.193 distributions installed(myLocalPerl) ➜ parallelLastz git:(master) ✗ perl parallelLastz.pl Can't locate Bio/SeqIO.pm in @INC (you may...2141 days ago