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CISA: Contig Integrator for Sequence Assembly
...nd the hybrid assemblies merged by existing tools. This tool is implemented in Python and requires MUMmer and BLAST+ to be installed on the local machine. The source code of CISA and...2712 days ago
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FSA: Fast Statistical Alignment
...aligning thousands of sequences or megabase-long sequences. FSA introduces several novel methods for constructing better alignments: FSA uses machine-learning techniques to estima...2659 days ago
Artificial Intelligence Material !
Major Machine Learning Types Explianed in 11 Pages Credit: McKinsey For more applied resource you can see at: 1. Data Science Process https://lnkd.in/fMHtxYP 2. Data Vi...1752 days ago
SuRankCo: supervised ranking of contigs in de novo assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with k...2552 days ago
LIBSVM -- A Library for Support Vector Machines
...oposed in this paper:R.-E. Fan, P.-H. Chen, and C.-J. Lin. Working set selection using second order information for training SVM. Journal of Machine Learning Research 6, 1889-191...2482 days ago
simNGS and simLibrary – Software for Simulating Next-Gen Sequencing Data
...imNGS is software for simulating observations from Illumina sequencing machines using the statistical models...nce of noise between bases and cycles observed in an actual run of the machine, randomly generates noisy int...2364 days ago
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