BOL: Results for "next"

Results for "next"

- Neelam Jha@neelam
AMStat: display statistics of large sequence files from next generation sequencing projects
SAMStat is an efficient C program to quickly display statistics of large sequence files from next generation sequencing projects. When applied to SAM/BAM files all statistics are reported for unmapped, poorly and accurately mapped reads separately. This allows for identification of a va...
Tags: display, statistics, large, sequence, next, generation, sequencing, projects, NGS, SAMstats
2007 days ago
- Rahul Nayak@rahul
Error: Could not find dictionary next to reference file file
htsjdk.samtools.SAMException: Could not find dictionary next to reference file file:///data/sata_data/workshop/wsu29/Parivartan/snakemake_germline_legacy/references/GRCh38.primary_assembly.genome.fa
Tags: dictionary, next, reference, file, samtools, SAMException
1548 days ago
- BioStar@biostar
McClintock: Meta-pipeline to identify transposable element insertions using next generation sequencing data
an integrated bioinformatics pipeline for the detection of TE insertions in whole-genome shotgun data, called McClintock (https://github.com/bergmanlab/mcclintock), which automatically runs and standardizes output for multiple TE detection methods. We demonstrate the utility of McClintock by eval...
Tags: McClintock, Meta-pipeline, identify, transposable, element, insertions, next, generation, sequencing, data
1290 days ago