2353 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED datab...the overhead of a database. MAKER is available for download and can be tested online via the MAKER Web Annotation...2334 days ago
PerlOneLiner for Bioinformatician
FILE SPACING------------ # Double space a fileperl -pe '$\="\n"'perl -pe 'BEGIN { $\="\n" }'p...t; $p = 0 } $p++ if /regex/' # Print lines that match regex AAA and regex BBB in any orderp...2305 days ago
2294 days ago
Awk for Bioinformatician and computational biologist
Awk is a programming language which allows easy manipulation of structured data and is most...r each line, it matches with given pattern in the given order, i...you want and they will be executed on each line in the order...2282 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS analysis tool that allows biologists to analyze their data using a very intuit...next-generation sequencing based testing, clinical genomics, and personalized medici...2266 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between...ne to make it far rarer in multicellular eukaryotes. In order fo...lex organisms it must enter the sequestered germline in order...853 days ago
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bioinformatics | Oxford...9.html Bandage by rrwick https://rrwick.github.io/Bandage/ Codon Optimization OnLine (COOL): a web-based multi-obj...2244 days ago
Installing Bio::SCF perl module
Most Perl modules are written in Perl, some use XS (they are wr...check this http://bioinformaticsonline.com/blog/view/710/how-to-ins...f.h 2. Now make io_lib-1.9 In order to...or zlib.h... yeschecking whether byte ordering is bigendian... nochecking...2221 days ago
Protein-Protein Interaction Sites Predictions !
The study of Protein–Protein Interactions (PPIs) has a crucial role in biology, medicine and the pharmaceutical industry. PPIs can be investigated from two aspects: The interaction partners...2205 days ago