visNetwork: an R package for network visualization, using vis.js javascript library
visNetwork is an R package for network visualization, using vis.js javascript library (h...atible with shiny, R Markdown documents, and RStudio viewer The package proposes all the features ava...1956 days ago
1987 days ago
1985 days ago
regioneR: an R package for the management and comparison of genomic regions
Regioner is an R package for the management and comparison of genomic regions. It offers a set of function for basic manipulation of region sets extending the functionality of G...1985 days ago
genoPlotR - plot gene and genome maps project!
genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files an...1984 days ago
SiLiX: implements an ultra-efficient algorithm for the clustering of homologous sequences
The software package SiLiX implements an ultra-efficient algorithm for the clustering of h...A parallel version of SiLiX, based on MPI, is also available in this package and has been proved to be sca...1984 days ago
EGAD: Ultra-fast functional analysis of gene networks
With the EGAD (Extending ‘Guilt-by-Association’ by Degree) package, we present a series of highly efficient tools to calculate functional properties in networks based on t...1982 days ago
1980 days ago
Biotite: A general framework for computational biology
The package is open source and freely available...ithub.com/biotite-dev/biotite). This package is simple to use especially f...n. Biotite consists of four sub packages: sequence, structure, databa...ftware. The Biotite package bundles popular tasks in comp...1979 days ago
Versatile genome assembly evaluation with QUAST-LG
...on of QUAST intended for evaluating large-scale genome assemblies (up to mammalian-size). QUAST-LG is included in the QUAST package starting from version 5.0.0 (...1975 days ago