Five key traits to seek out in potential bioinformatics candidates !!!
...ng of biological problems. The bioinformatics can discover biological patterns and stories in genomic and pr...thless. Good bioinformatics scientists are able to uncover biological patterns and are willing to explain th...3226 days ago
Computer simulation of genetic mechanism !!
...EpiSIM: simulation of multiple epistasis, linkage disequilibrium patterns and haplotype blocks for geno...A coalescent program for the simulation of complex recombination patterns over large genomic regions un...3010 days ago
Public Databases for Bioinformatics !
...er results can be reproduced /srv/www/$LABNAME/ web accessible from mitra.stanford.edu *NOT BACKED UP* Some parallel programming patterns: # gzip a bunch of files...1174 days ago
Software developed in pevsner lab
...ardization and Normalization of Microarray Data SNPduo: SNP Analysis Between Two Individuals SNPtrio: Analyzing and Visualizing and Inheritance Patterns in Trios SNPscan: Data Analy...3534 days ago
Regular Expression Cheat Sheet
...Regular Expressions Cheat Sheet, a quick reference guide for regular expressions, including symbols, ranges, grouping, assertions and some sample patterns to get you started.3988 days ago
Virtual Bioinformatics Online Tutorial
...onUniversite de) Rouen , France A Guide to Molecular Sequence Analysis National Hospital Univ of Oslo , Norway Distant homologies: motifs, patterns, profiles International...3956 days ago
Awesome perl frameworks, libraries and software - PART 3
...e repository for the upcoming book, Modern Perl with CPAN jeffa/DesignPatterns-Perl - Perl (with Moose) implementations of the Gang of Four Design Patterns agentzh/makefile-parser-pm&n...2529 days ago
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Bioinformatics approach helps researchers find new uses for old drug
Gene expression patterns suggest an antimicrobial may help treat advanced kidney cancer3682 days ago
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Perl script to extract lines with matching ids !!
#!/usr/bin/perl use strict; use warnings; my %patterns; #USAGE: perl extactByIds.pl Idsfile1 file2 > Result # Open file and get patterns to search for open(my $fh2,"2910 days ago
Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA and proteins). We also provide biological motivation, and methods of biological verification of such patterns. Finally we list publicly available tools and databases for pattern discov...Tags: Bioinformatics, Patterns, Tools, Book, Tutorial, Paper, Script, Algo
2726 days ago
Patterns: a modeling tool dedicated to biological network modeling
It is designed to work with patterned data. Famous examples of problems related to patterned data are: recovering signals in networks after a stimulation (cascade network reverse engineering), analysing periodic signals.Tags: Patterns, modeling, tool, biological, network, modeling
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Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...is a comprehensive source for protocols and reviews in the multidisciplinary field of bioinformatics, including the areas of analyzing expression patterns, pathway analysis, recognizin...1577 days ago