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Results for "pe"

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• • Radha Agarkar@radhaagarkar

  

  How to extract 50% of the reads?

  I would like to extract a subset of PE reads (50%) and store them in seperate files. It should be in both way "split by middle" or "random". Is there any way to achieve it?

  Tags: Reads, NGS, PE, Extract

  2825 days ago

• • Archana Malhotra@archana

  

  What are the best way to merge paired end reads ?

  I want to merge PE reads. Can you please suggest me good tools.

  Tags: Merge, Reads, PE, NGS

  2350 days ago

• • Rahul Nayak@rahul

  

  Understanding PairedEnd(PE) mapping https://davetang.org/muse/2014/07/24/getting-started-paired-end-reads/ #PE #Paired #End #PairedEnd #Mapping #Map #Learn

  Tags: PE, Paired, End, PairedEnd, Mapping, Map, Learn

  2106 days ago

• • BioStar@biostar

  

  Understanding Paired End and Mate pair reads http://www.biorigami.com/wp-content/uploads/2012/02/PAIREDEND-MATEPAIR.pdf #Reads #Mate #Pairs #PE #Reads #MatePair

  Tags: Reads, Mate, Pairs, PE, Reads, MatePair

  2060 days ago

• • biogeek@biogeek

  

  error: mate does not occur next to it in your BAM file. How to fix it ?

  *****WARNING: Query v300043428L4C001R0481272249 is marked as paired, but its mate does not occur next to it in your BAM file.  Skipping.

  Tags: samtools, paired, pe, error, mates reads

  1472 days ago

• • biogeek@biogeek

  

  When to use bbmap ?

  I recently came across bbmap. When to use it ?

  Tags: bbmap, mapping, pe, reads

  1456 days ago